bolus: add tests for partial entries, propagate requested_insulin

This commit is contained in:
James Woglom
2021-10-14 02:02:57 -04:00
parent 87f531cbb3
commit 3be0289177
5 changed files with 194 additions and 13 deletions
+7 -3
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@@ -85,16 +85,20 @@ class TConnectEntry:
@staticmethod
def parse_bolus_entry(data):
# All DateTime's are stored in the user's timezone.
complete = (data["ExtendedBolusIsComplete"] or data["BolusIsComplete"])
def is_complete(s):
return s and int(s) == 1
complete = is_complete(data["ExtendedBolusIsComplete"]) or is_complete(data["BolusIsComplete"])
extended_bolus = ("extended" in data["Description"].lower())
return {
"description": data["Description"],
"complete": "1" if complete else "",
"completion": data["CompletionStatusDesc"] if not extended_bolus else data["BolexCompletionStatusDesc"],
"request_time": TConnectEntry._datetime_parse(data["RequestDateTime"]).format() if complete and not extended_bolus else None,
"completion_time": TConnectEntry._datetime_parse(data["CompletionDateTime"]).format() if complete and not extended_bolus else None,
"request_time": TConnectEntry._datetime_parse(data["RequestDateTime"]).format() if not extended_bolus else None,
"completion_time": TConnectEntry._datetime_parse(data["CompletionDateTime"]).format() if not extended_bolus else None,
"insulin": data["InsulinDelivered"],
"requested_insulin": data["ActualTotalBolusRequested"],
"carbs": data["CarbSize"],
"user_override": data["UserOverride"],
"extended_bolus": "1" if extended_bolus else "",
+1 -1
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@@ -20,7 +20,7 @@ def process_bolus_events(bolusdata):
if parsed["completion"] != "Completed":
if parsed["insulin"] and float(parsed["insulin"]) > 0:
# Count non-completed bolus if any insulin was delivered (vs. the amount of insulin requested)
parsed["description"] += " (%s)" % parsed["completion"]
parsed["description"] += " (%s: requested %s units)" % (parsed["completion"], parsed["requested_insulin"])
else:
logger.warning("Skipping non-completed bolus data (was a bolus in progress?): %s parsed: %s" % (b, parsed))
continue
+125
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@@ -147,6 +147,7 @@ class TestTConnectEntryBolus(unittest.TestCase):
"request_time": "2021-04-01 12:53:36-04:00",
"completion_time": "2021-04-01 12:58:26-04:00",
"insulin": "13.53",
"requested_insulin": "13.53",
"carbs": "75",
"user_override": "0",
"extended_bolus": "",
@@ -207,6 +208,7 @@ class TestTConnectEntryBolus(unittest.TestCase):
"request_time": "2021-04-01 23:21:58-04:00",
"completion_time": "2021-04-01 23:23:17-04:00",
"insulin": "1.25",
"requested_insulin": "1.25",
"carbs": "0",
"user_override": "1",
"extended_bolus": "",
@@ -267,12 +269,135 @@ class TestTConnectEntryBolus(unittest.TestCase):
"request_time": "2021-04-02 00:59:13-04:00",
"completion_time": "2021-04-02 01:00:47-04:00",
"insulin": "1.70",
"requested_insulin": "1.70",
"carbs": "0",
"user_override": "0",
"extended_bolus": "",
"bolex_completion_time": None,
"bolex_start_time": None
})
entryStdIncompleteZero = {
"Type": "Bolus",
"Description": "Standard",
"BG": "144",
"IOB": "1.20",
"BolusRequestID": "9694.000",
"BolusCompletionID": "9694.000",
"CompletionDateTime": "2021-10-08T15:47:02",
"InsulinDelivered": "0.00",
"FoodDelivered": "0.00",
"CorrectionDelivered": "0.00",
"CompletionStatusID": "0",
"CompletionStatusDesc": "User Aborted",
"BolusIsComplete": "0",
"BolexCompletionID": "",
"BolexSize": "",
"BolexStartDateTime": "",
"BolexCompletionDateTime": "",
"BolexInsulinDelivered": "",
"BolexIOB": "",
"BolexCompletionStatusID": "",
"BolexCompletionStatusDesc": "",
"ExtendedBolusIsComplete": "",
"EventDateTime": "2021-10-08T15:46:56",
"RequestDateTime": "2021-10-08T15:46:56",
"BolusType": "Carb",
"BolusRequestOptions": "Standard",
"StandardPercent": "100.00",
"Duration": "0",
"CarbSize": "0",
"UserOverride": "1",
"TargetBG": "110",
"CorrectionFactor": "30.00",
"FoodBolusSize": "0.00",
"CorrectionBolusSize": "0.00",
"ActualTotalBolusRequested": "0.50",
"IsQuickBolus": "0",
"EventHistoryReportEventDesc": "0",
"EventHistoryReportDetails": "Food Bolus",
"NoteID": "CF 1:30 - Carb Ratio 1:6 - Target BG 110 | Override: Pump calculated Bolus = 0.0 units",
"IndexID": "0",
"Note": "1669328"
}
def test_parse_bolus_entry_std_incomplete_zero(self):
self.assertEqual(
TConnectEntry.parse_bolus_entry(self.entryStdIncompleteZero),
{
"description": "Standard",
"complete": "",
"completion": "User Aborted",
"request_time": "2021-10-08 15:46:56-04:00",
"completion_time": "2021-10-08 15:47:02-04:00",
"insulin": "0.00",
"requested_insulin": "0.50",
"carbs": "0",
"user_override": "1",
"extended_bolus": "",
"bolex_completion_time": None,
"bolex_start_time": None
})
entryStdIncompletePartial = {
"Type": "Bolus",
"Description": "Standard/Correction",
"BG": "189",
"IOB": "",
"BolusRequestID": "9261.000",
"BolusCompletionID": "9261.000",
"CompletionDateTime": "2021-09-06T12:24:47",
"InsulinDelivered": "1.82",
"FoodDelivered": "0.00",
"CorrectionDelivered": "1.82",
"CompletionStatusID": "1",
"CompletionStatusDesc": "Terminated by Alarm",
"BolusIsComplete": "0",
"BolexCompletionID": "",
"BolexSize": "",
"BolexStartDateTime": "",
"BolexCompletionDateTime": "",
"BolexInsulinDelivered": "",
"BolexIOB": "",
"BolexCompletionStatusID": "",
"BolexCompletionStatusDesc": "",
"ExtendedBolusIsComplete": "",
"EventDateTime": "2021-09-06T12:23:23",
"RequestDateTime": "2021-09-06T12:23:23",
"BolusType": "Carb",
"BolusRequestOptions": "Standard/Correction",
"StandardPercent": "100.00",
"Duration": "0",
"CarbSize": "0",
"UserOverride": "0",
"TargetBG": "110",
"CorrectionFactor": "30.00",
"FoodBolusSize": "0.00",
"CorrectionBolusSize": "2.63",
"ActualTotalBolusRequested": "2.63",
"IsQuickBolus": "0",
"EventHistoryReportEventDesc": "0",
"EventHistoryReportDetails": "Correction & Food Bolus",
"NoteID": "CF 1:30 - Carb Ratio 1:6 - Target BG 110",
"IndexID": "0",
"Note": "1589227"
}
def test_parse_bolus_entry_std_incomplete_partial(self):
self.assertEqual(
TConnectEntry.parse_bolus_entry(self.entryStdIncompletePartial),
{
"description": "Standard/Correction",
"complete": "",
"completion": "Terminated by Alarm",
"request_time": "2021-09-06 12:23:23-04:00",
"completion_time": "2021-09-06 12:24:47-04:00",
"insulin": "1.82",
"requested_insulin": "2.63",
"carbs": "0",
"user_override": "0",
"extended_bolus": "",
"bolex_completion_time": None,
"bolex_start_time": None
})
if __name__ == '__main__':
unittest.main()
+57 -7
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@@ -1,6 +1,7 @@
#!/usr/bin/env python3
import unittest
import random
from tconnectsync.sync.bolus import process_bolus_events
from tconnectsync.parser.tconnect import TConnectEntry
@@ -12,23 +13,72 @@ class TestBolusSync(unittest.TestCase):
@staticmethod
def get_example_csv_bolus_events():
return [
TestTConnectEntryBolus.entryStdCorrection,
TestTConnectEntryBolus.entryStd,
TestTConnectEntryBolus.entryStdAutomatic,
TestTConnectEntryBolus.entryStdIncompletePartial
]
def test_process_bolus_events_standard(self):
bolusData = [
TestTConnectEntryBolus.entryStdCorrection,
TestTConnectEntryBolus.entryStd,
TestTConnectEntryBolus.entryStdAutomatic
]
def test_process_bolus_events(self):
bolusData = TestBolusSync.get_example_csv_bolus_events()
bolusEvents = process_bolus_events(bolusData)
self.assertEqual(len(bolusEvents), 3)
self.assertEqual(len(bolusEvents), len(bolusData))
self.assertListEqual(bolusEvents, [
TConnectEntry.parse_bolus_entry(bolusData[0]),
TConnectEntry.parse_bolus_entry(bolusData[1]),
TConnectEntry.parse_bolus_entry(bolusData[2])
TConnectEntry.parse_bolus_entry(d) for d in bolusData
])
def test_process_bolus_events_update_partial_description(self):
stdData = [
TestTConnectEntryBolus.entryStdCorrection,
TestTConnectEntryBolus.entryStd,
TestTConnectEntryBolus.entryStdAutomatic
]
partialData = [
TestTConnectEntryBolus.entryStdIncompletePartial
]
bolusData = stdData + partialData
bolusEvents = process_bolus_events(bolusData)
self.assertEqual(len(bolusEvents), len(bolusData))
partialEntries = [
TConnectEntry.parse_bolus_entry(e) for e in partialData
]
for e in partialEntries:
e["description"] += " (%s: requested %s units)" % (e["completion"], e["requested_insulin"])
self.assertListEqual(bolusEvents, [
TConnectEntry.parse_bolus_entry(d) for d in stdData
] + partialEntries)
def test_process_bolus_events_skip_zero(self):
stdData = [
TestTConnectEntryBolus.entryStdCorrection,
TestTConnectEntryBolus.entryStd,
TestTConnectEntryBolus.entryStdAutomatic
]
zeroData = [
TestTConnectEntryBolus.entryStdIncompleteZero
]
bolusData = stdData + zeroData
bolusEvents = process_bolus_events(bolusData)
self.assertEqual(len(bolusEvents), len(stdData))
self.assertListEqual(bolusEvents, [
TConnectEntry.parse_bolus_entry(d) for d in stdData
])
for d in zeroData:
self.assertNotIn(TConnectEntry.parse_bolus_entry(d), bolusEvents)
if __name__ == '__main__':
unittest.main()
+4 -2
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@@ -166,10 +166,11 @@ class TestProcessTimeRange(unittest.TestCase):
tconnect.controliq.therapy_timeline = self.stub_therapy_timeline
bolusData = TestBolusSync.get_example_csv_bolus_events()
def fake_therapy_timeline_csv(time_start, time_end):
return {
**self.stub_therapy_timeline_csv(time_start, time_end),
"bolusData": TestBolusSync.get_example_csv_bolus_events(),
"bolusData": bolusData,
}
tconnect.ws2.therapy_timeline_csv = fake_therapy_timeline_csv
@@ -182,12 +183,13 @@ class TestProcessTimeRange(unittest.TestCase):
process_time_range(tconnect, nightscout, start, end, pretend=False)
pprint.pprint(nightscout.uploaded_entries)
self.assertEqual(len(nightscout.uploaded_entries["treatments"]), 3)
self.assertEqual(len(nightscout.uploaded_entries["treatments"]), len(bolusData))
self.assertDictEqual(dict(nightscout.uploaded_entries), {
"treatments": [
NightscoutEntry.bolus(13.53, 75, "2021-04-01 12:58:26-04:00", notes="Standard/Correction"),
NightscoutEntry.bolus(1.25, 0, "2021-04-01 23:23:17-04:00", notes="Standard (Override)"),
NightscoutEntry.bolus(1.7, 0, "2021-04-02 01:00:47-04:00", notes="Automatic Bolus/Correction"),
NightscoutEntry.bolus(1.82, 0, "2021-09-06 12:24:47-04:00", notes="Standard/Correction (Terminated by Alarm: requested 2.63 units)"),
]})
self.assertDictEqual(nightscout.put_entries, {})
self.assertDictEqual(nightscout.deleted_entries, {})